RNA-dependent RNA polymerase 1 in potato (Solanum tuberosum) and its relationship to other plant RNA-dependent RNA polymerases
Identifieur interne : 000067 ( Main/Exploration ); précédent : 000066; suivant : 000068RNA-dependent RNA polymerase 1 in potato (Solanum tuberosum) and its relationship to other plant RNA-dependent RNA polymerases
Auteurs : Lydia J. R. Hunter [Royaume-Uni] ; Samuel F. Brockington [Royaume-Uni] ; Alex M. Murphy [Royaume-Uni] ; Adrienne E. Pate [Royaume-Uni] ; Kristina Gruden [Slovénie] ; Stuart A. Macfarlane [Royaume-Uni] ; Peter Palukaitis [Royaume-Uni, Corée du Sud] ; John P. Carr [Royaume-Uni]Source :
- Scientific Reports [ 2045-2322 ] ; 2016.
Abstract
Cellular RNA-dependent RNA polymerases (RDRs) catalyze synthesis of double-stranded RNAs that can serve to initiate or amplify RNA silencing.
Url:
DOI: 10.1038/srep23082
PubMed: 26979928
PubMed Central: 4793286
Affiliations:
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Hunter</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="a2"><institution>The James Hutton Institute</institution>, Invergowrie, Dundee DD2 5DA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Brockington, Samuel F" sort="Brockington, Samuel F" uniqKey="Brockington S" first="Samuel F." last="Brockington">Samuel F. Brockington</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Murphy, Alex M" sort="Murphy, Alex M" uniqKey="Murphy A" first="Alex M." last="Murphy">Alex M. Murphy</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Pate, Adrienne E" sort="Pate, Adrienne E" uniqKey="Pate A" first="Adrienne E." last="Pate">Adrienne E. 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Carr</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26979928</idno><idno type="pmc">4793286</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4793286</idno><idno type="RBID">PMC:4793286</idno><idno type="doi">10.1038/srep23082</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000460</idno><idno type="wicri:Area/Pmc/Curation">000459</idno><idno type="wicri:Area/Pmc/Checkpoint">000051</idno><idno type="wicri:Area/Ncbi/Merge">001F62</idno><idno type="wicri:Area/Ncbi/Curation">001F62</idno><idno type="wicri:Area/Ncbi/Checkpoint">001F62</idno><idno type="wicri:Area/Main/Merge">000067</idno><idno type="wicri:Area/Main/Curation">000067</idno><idno type="wicri:Area/Main/Exploration">000067</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">RNA-dependent RNA polymerase 1 in potato (<italic>Solanum tuberosum</italic>) and its relationship to other plant RNA-dependent RNA polymerases</title><author><name sortKey="Hunter, Lydia J R" sort="Hunter, Lydia J R" uniqKey="Hunter L" first="Lydia J. R." last="Hunter">Lydia J. R. Hunter</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="a2"><institution>The James Hutton Institute</institution>, Invergowrie, Dundee DD2 5DA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Brockington, Samuel F" sort="Brockington, Samuel F" uniqKey="Brockington S" first="Samuel F." last="Brockington">Samuel F. Brockington</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Murphy, Alex M" sort="Murphy, Alex M" uniqKey="Murphy A" first="Alex M." last="Murphy">Alex M. Murphy</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Pate, Adrienne E" sort="Pate, Adrienne E" uniqKey="Pate A" first="Adrienne E." last="Pate">Adrienne E. Pate</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Gruden, Kristina" sort="Gruden, Kristina" uniqKey="Gruden K" first="Kristina" last="Gruden">Kristina Gruden</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>National Institute of Biology</institution>, Večna pot 111, 1000 Ljubljana,<country>Slovenia</country></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Macfarlane, Stuart A" sort="Macfarlane, Stuart A" uniqKey="Macfarlane S" first="Stuart A." last="Macfarlane">Stuart A. Macfarlane</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>The James Hutton Institute</institution>, Invergowrie, Dundee DD2 5DA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Palukaitis, Peter" sort="Palukaitis, Peter" uniqKey="Palukaitis P" first="Peter" last="Palukaitis">Peter Palukaitis</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>The James Hutton Institute</institution>, Invergowrie, Dundee DD2 5DA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="a4"><institution>Division of Environmental and Life Sciences, Seoul Women’s University</institution>, Seoul,<country>Republic of Korea</country></nlm:aff><country xml:lang="fr">Corée du Sud</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Carr, John P" sort="Carr, John P" uniqKey="Carr J" first="John P." last="Carr">John P. Carr</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Plant Sciences, University of Cambridge</institution>, Cambridge CB2 3EA,<country>UK</country></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Scientific Reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Cellular RNA-dependent RNA polymerases (RDRs) catalyze synthesis of double-stranded RNAs that can serve to initiate or amplify RNA silencing. <italic>Arabidopsis thaliana</italic> has six <italic>RDR</italic> genes; <italic>RDRs 1</italic>, <italic>2</italic> and <italic>6</italic> have roles in anti-viral RNA silencing. <italic>RDR6</italic> is constitutively expressed but <italic>RDR1</italic> expression is elevated following plant treatment with defensive phytohormones. RDR1 also contributes to basal virus resistance. RDR1 has been studied in several species including <italic>A. thaliana</italic>, tobacco (<italic>Nicotiana tabacum</italic>), <italic>N. benthamiana</italic>, <italic>N. attenuata</italic> and tomato (<italic>Solanum lycopersicum</italic>) but not to our knowledge in potato (<italic>S. tuberosum</italic>). <italic>StRDR1</italic> was identified and shown to be salicylic acid-responsive. <italic>StRDR1</italic> transcript accumulation decreased in transgenic potato plants constitutively expressing a hairpin construct and these plants were challenged with three viruses: potato virus Y, potato virus X, and tobacco mosaic virus. Suppression of <italic>StRDR1</italic> gene expression did not increase the susceptibility of potato to these viruses. Phylogenetic analysis of <italic>RDR</italic> genes present in potato and in a range of other plant species identified a new <italic>RDR</italic> gene family, not present in potato and found only in Rosids (but apparently lost in the Rosid <italic>A. thaliana</italic>) for which we propose the name <italic>RDR7</italic>.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Csorba, T" uniqKey="Csorba T">T. Csorba</name></author><author><name sortKey="Pantaleo, V" uniqKey="Pantaleo V">V. Pantaleo</name></author><author><name sortKey="Burgyan, J" uniqKey="Burgyan J">J. Burgyan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fagard, M" uniqKey="Fagard M">M. Fagard</name></author><author><name sortKey="Boutet, S" uniqKey="Boutet S">S. Boutet</name></author><author><name sortKey="Morel, J B" uniqKey="Morel J">J.-B. Morel</name></author><author><name sortKey="Bellini, C" uniqKey="Bellini C">C. 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Doyle</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Corée du Sud</li><li>Royaume-Uni</li><li>Slovénie</li></country></list><tree><country name="Royaume-Uni"><noRegion><name sortKey="Hunter, Lydia J R" sort="Hunter, Lydia J R" uniqKey="Hunter L" first="Lydia J. R." last="Hunter">Lydia J. R. Hunter</name></noRegion><name sortKey="Brockington, Samuel F" sort="Brockington, Samuel F" uniqKey="Brockington S" first="Samuel F." last="Brockington">Samuel F. Brockington</name><name sortKey="Carr, John P" sort="Carr, John P" uniqKey="Carr J" first="John P." last="Carr">John P. Carr</name><name sortKey="Hunter, Lydia J R" sort="Hunter, Lydia J R" uniqKey="Hunter L" first="Lydia J. R." last="Hunter">Lydia J. R. Hunter</name><name sortKey="Macfarlane, Stuart A" sort="Macfarlane, Stuart A" uniqKey="Macfarlane S" first="Stuart A." last="Macfarlane">Stuart A. Macfarlane</name><name sortKey="Murphy, Alex M" sort="Murphy, Alex M" uniqKey="Murphy A" first="Alex M." last="Murphy">Alex M. Murphy</name><name sortKey="Palukaitis, Peter" sort="Palukaitis, Peter" uniqKey="Palukaitis P" first="Peter" last="Palukaitis">Peter Palukaitis</name><name sortKey="Pate, Adrienne E" sort="Pate, Adrienne E" uniqKey="Pate A" first="Adrienne E." last="Pate">Adrienne E. Pate</name></country><country name="Slovénie"><noRegion><name sortKey="Gruden, Kristina" sort="Gruden, Kristina" uniqKey="Gruden K" first="Kristina" last="Gruden">Kristina Gruden</name></noRegion></country><country name="Corée du Sud"><noRegion><name sortKey="Palukaitis, Peter" sort="Palukaitis, Peter" uniqKey="Palukaitis P" first="Peter" last="Palukaitis">Peter Palukaitis</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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